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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
ChIP-seq
19
ATAC-seq
6
total RNA-seq
4
FAIRE-seq
1
WGBS
Assay category
174
DNA binding
23
DNA accessibility
6
Transcription
1
DNA methylation
Target of assay
164
control
9
histone
9
histone modification
9
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
31
May, 2020
29
October, 2018
27
October, 2019
24
May, 2022
23
May, 2019
15
April, 2019
12
August, 2017
12
December, 2017
12
November, 2017
4
December, 2018
4
November, 2018
4
September, 2017
3
July, 2019
2
October, 2017
1
January, 2019
1
March, 2019
Available data
204
bam
151
tsv
122
tagAlign
101
bed narrowPeak
97
fastq
68
txt
60
bigWig
22
bed broadPeak
11
hic
10
bedpe bed3+
9
bed bedMethyl
9
bigBed bedMethyl
6
bigBed narrowPeak
5
bed bed3
1
bed bed3+
1
bedpe
Organism
203
Homo sapiens
Biosample type
204
tissue
116
cell line
83
primary cell
26
in vitro differentiated cells
Organ
50
liver
46
pancreas
25
brain
19
adipose tissue
19
connective tissue
18
limb
17
blood vessel
17
vasculature
16
heart
11
nerve
8
kidney
8
spleen
7
artery
2
musculature of body
Project
204
AMP
Genome assembly (visualization)
GRCh38
1194
hg19
Lab
179
AMP-T2D consortium
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
assembly!
GRCh38
month_released!
February, 2021
BIOSAMPLE
ASSAY
204 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
FAIRE-seq
WGBS
tissue
liver
47
islet of Langerhans
5
19
6
1
tibial nerve
11
subcutaneous adipose tissue
10
body of pancreas
9
+ See 37 more…
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