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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
73
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
3
Hi-C
Assay category
165
Transcription
60
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
56
September, 2020
February, 2021
3
October, 2022
Available data
153
zippedFastqFolder
114
fastq
3
bedpe bed3+
3
cool
3
hic
Organism
269
Homo sapiens
Biosample type
269
primary cell
Organ
136
epithelium
136
pancreas
Project
1258
AMP
269
HPAP
58
T1D
47
KPMP
4
community
Genome assembly (visualization)
GRCh38
3
hg19
Lab
269
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assembly!
GRCh38
month_released!
February, 2021
organ_slims!
lung
urinary bladder
BIOSAMPLE
ASSAY
269 results
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total RNA-seq
single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
73
21
pancreatic alpha cell
42
25
22
1
pancreatic beta cell
11
16
13
1
exocrine cell
39
pancreatic acinar cell
4
1
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