Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
snATAC-seq
17
pCHi-C
11
ATAC-seq
9
single cell RNA-seq
7
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
39
DNA accessibility
16
Transcription
Date released
23
February, 2023
19
April, 2020
17
May, 2021
16
January, 2021
2
March, 2020
Organism
76
Homo sapiens
Biosample type
48
tissue
24
primary cell
5
cell line
Organ
28
pancreas
19
lung
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
1352
AMP
314
HPAP
58
T1D
47
KPMP
19
LungMap
4
community
Genome assembly (visualization)
GRCh38
186
hg19
Lab
56
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
organ_slims!
vein
BIOSAMPLE
ASSAY
77 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
pCHi-C
ATAC-seq
single cell RNA-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
tissue
islet of Langerhans
6
11
7
lung
10
9
pancreas
4
thymus
1
primary cell
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 11 more…
cell line
EndoC_BH1
3
2
See all biosamples