Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 64single cell RNA-seq
  • 49total RNA-seq
  • 7ChIP-seq
  • 6snATAC-seq
  • 1FAIRE-seq
  • 1Hi-C
  • 1RRBS
Assay category
  • 113Transcription
  • 7DNA accessibility
  • 7DNA binding
  • 13D chromatin structure
  • 1DNA methylation
Target of assay
  • 6control
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 64August, 2021
  • 47September, 2023
  • 5April, 2019
  • 5February, 2021
  • 3May, 2023
  • 2July, 2019
  • 2October, 2019
  • 1December, 2019
Available data
  • 62txt
  • 8bam
  • 5csv
  • 5tsv
  • 1bed bedMethyl
  • 1bed narrowPeak
  • 1bigBed bedMethyl
  • 1bigBed narrowPeak
  • 1bigWig
  • 1hic
Organism
  • 129Homo sapiens
Biosample type
  • 129tissue
Organ
  • 129kidney
Project
  • 82AMP
  • 47KPMP
Genome assembly (visualization)
  • GRCh38
  • 36hg19
Lab
  • 67Katalin Susztak, Upenn
  • 47KPMP
  • 15AMP-T2D consortium
Audit category:
  • 5audit script error
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

129 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
snATAC-seq
FAIRE-seq
Hi-C
RRBS
tissue
kidney644976111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego