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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 70ChIP-seq
  • 20ATAC-seq
  • 20total RNA-seq
  • 3WGBS
  • 1Hi-C
  • 1RRBS
  • 1pCHi-C
  • 1single cell RNA-seq
Assay category
  • 70DNA binding
  • 21Transcription
  • 20DNA accessibility
  • 4DNA methylation
  • 13D chromatin structure
Target of assay
  • 42control
  • 28histone
  • 28histone modification
  • 16narrow histone mark
  • 12broad histone mark
Date released
  • 40May, 2022
  • 34August, 2017
  • 31May, 2020
  • 9December, 2017
  • 2March, 2020
  • 1February, 2021
Available data
  • 51tagAlign
  • 47bam
  • 28bed narrowPeak
  • 28bigWig
  • 18fastq
  • 1bed bedMethyl
  • 1bedpe bed3+
  • 1bigBed bedMethyl
  • 1csv
  • 1hic
  • 1tsv
Organism
  • 117Homo sapiens
Biosample type
  • 117tissue
Organ
  • 117liver
Project
  • 117AMP
Genome assembly (visualization)
  • 255hg19
  • GRCh38
Lab
  • 77AMP-T2D consortium
  • 40Karen Mohlke, UNC
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

117 results

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ChIP-seq
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total RNA-seq
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single cell RNA-seq
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