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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
Assay category
129
DNA binding
Target of assay
72
histone
72
histone modification
57
control
37
broad histone mark
35
narrow histone mark
Date released
53
August, 2017
31
May, 2020
24
November, 2017
9
October, 2019
8
October, 2017
3
February, 2021
1
August, 2021
Available data
406
bam
383
fastq
223
bigWig
196
tsv
181
bed narrowPeak
157
txt
153
zippedFastqFolder
129
tagAlign
42
bigBed narrowPeak
40
bed broadPeak
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
18
hic
16
bedpe bed3+
9
bed bed3+
8
csv
5
bed bed3
4
hdf5
4
tar
3
cool
1
bedpe
1
vcf
Organism
129
Homo sapiens
Biosample type
121
tissue
in vitro differentiated cells
6
cell line
2
primary cell
Organ
55
liver
36
brain
15
musculature of body
9
pancreas
8
adipose tissue
8
connective tissue
2
artery
2
blood vessel
2
heart
2
vasculature
1
epithelium
Project
129
AMP
Genome assembly (visualization)
GRCh38
215
hg19
Lab
129
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
biosample_type!
in vitro differentiated cells
month_released!
August, 2018
BIOSAMPLE
ASSAY
129 results
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ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
+ See 14 more…
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
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