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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
RNA microarray
9
single cell RNA-seq
4
ATAC-seq
3
ChIP-seq
3
snDrop-seq
1
pCHi-C
Assay category
9
Transcription
4
DNA accessibility
3
DNA binding
Target of assay
3
control
Date released
213
August, 2021
145
August, 2017
123
November, 2017
101
February, 2021
95
October, 2019
82
February, 2023
66
May, 2021
66
May, 2022
47
March, 2020
47
September, 2023
32
May, 2020
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
July, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2021
7
January, 2018
5
December, 2018
5
December, 2019
5
November, 2018
4
July, 2018
4
March, 2023
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
January, 2019
1
October, 2022
Available data
89
txt
12
tsv
6
csv
4
bed bedgraph
3
bam
3
tagAlign
1
bed bed3+
Organism
106
Homo sapiens
Biosample type
96
tissue
primary cell
6
in vitro differentiated cells
4
cell line
Organ
84
bone element
11
kidney
4
connective tissue
2
artery
2
blood vessel
2
heart
2
liver
2
vasculature
1
epithelium
Project
106
AMP
Genome assembly (visualization)
571
hg19
GRCh38
Lab
106
AMP-T2D consortium
Audit category:
86
inconsistent ontology term
9
audit script error
assembly!
GRCh38
biosample_type!
primary cell
organ_slims!
blood
BIOSAMPLE
ASSAY
106 results
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RNA microarray
single cell RNA-seq
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
6
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 3 more…
in vitro differentiated cells
adipocyte
4
cardiomyocytes (cardiac muscle cell)
2
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
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