Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
679
binding sites
661
histone modifications
406
candidate regulatory elements
284
target gene predictions
210
accessible chromatin
90
gene expression
21
chromatin state
10
differential activity
10
variant allelic effects
1
representative DNase hypersensitivity sites
Date released
1490
February, 2021
429
September, 2022
172
June, 2020
102
May, 2021
69
October, 2022
32
February, 2024
18
November, 2022
17
August, 2021
March, 2020
9
August, 2017
9
March, 2023
9
May, 2020
7
May, 2022
4
September, 2023
2
January, 2020
1
February, 2023
1
March, 2024
1
October, 2019
Available data
2251
bed bed3+
92
tsv
24
csv
7
bed bed9+
5
bed bed9
5
bigBed bed9
5
bigWig
Organism
2372
Homo sapiens
Biosample type
1977
cell line
1862
tissue
1756
primary cell
395
in vitro differentiated cells
2
stem cell
Organ
152
bodily fluid
144
blood
90
embryo
73
connective tissue
73
lung
69
brain
65
skin of body
64
epithelium
54
lymph node
44
prostate gland
43
bone element
32
mammary gland
32
pancreas
31
kidney
28
intestine
28
large intestine
25
liver
17
penis
16
musculature of body
15
eye
12
vasculature
11
uterus
10
pituitary gland
9
heart
6
extraembryonic component
6
gonad
6
limb
6
testis
5
blood vessel
4
lymphatic vessel
4
lymphoid tissue
3
adipose tissue
3
artery
3
mouth
3
nose
spinal cord
2
placenta
2
vein
Project
2363
AMP
9
community
Genome assembly (visualization)
2682
hg19
GRCh38
1
hg18
assembly!
GRCh38
month_released!
March, 2020
organ_slims!
spinal cord
BIOSAMPLE
TYPE
2372 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
variant allelic effects
representative DNase hypersensitivity sites
cell line
A549
2
1
21
19
1
EndoC_BH1
1
1
7
8
3
1
MCF-7
3
2
9
6
1
breast cancer cell
9
11
K562
2
1
7
7
1
1
+ See 754 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
1
19
10
1
1
adipocyte
1
1
4
6
4
1
4
neural progenitor cell
2
5
4
7
embryonic stem cell
1
1
6
5
cardiomyocytes
11
+ See 119 more…
See all biosamples
Download