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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
total RNA-seq
Assay category
3
3D chromatin structure
2
Transcription
Date released
3
July, 2019
2
May, 2021
Available data
180
fastq
153
zippedFastqFolder
93
bigWig
80
bam
34
bed narrowPeak
18
tsv
9
bed bedMethyl
9
bigBed bedMethyl
5
bed bed3+
5
hic
4
bed broadPeak
4
bedpe bed3+
4
bigBed broadPeak
4
bigBed narrowPeak
3
cool
3
hdf5
2
csv
2
tagAlign
1
tar
Organism
5
Homo sapiens
Biosample type
5
primary cell
1
cell line
1
tissue
Organ
3
brain
2
blood vessel
connective tissue
2
epithelium
2
vasculature
1
liver
Project
5
AMP
Genome assembly (visualization)
GRCh38
23
hg19
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
assembly!
GRCh38
organ_slims!
blood
connective tissue
BIOSAMPLE
ASSAY
5 results
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Clear Filters
Hi-C
total RNA-seq
primary cell
CD8-positive, alpha-beta T cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
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