Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
469
gene expression
328
candidate regulatory elements
255
target gene predictions
152
differential activity
140
accessible chromatin
122
histone modifications
94
binding sites
81
variant allelic effects
33
chromatin state
11
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
455
February, 2021
326
September, 2022
281
September, 2023
159
May, 2021
121
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
June, 2020
39
August, 2021
34
May, 2022
29
October, 2022
19
April, 2020
16
February, 2020
9
August, 2018
November, 2022
6
August, 2017
5
March, 2020
2
May, 2024
1
January, 2022
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2020
Available data
1035
bed bed3+
582
tsv
130
bigWig
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1657
Homo sapiens
Biosample type
1838
tissue
1835
cell line
1702
primary cell
366
in vitro differentiated cells
4
stem cell
Organ
586
epithelium
285
kidney
182
connective tissue
119
vasculature
102
pancreas
77
blood vessel
71
skin of body
35
musculature of body
34
penis
31
mammary gland
26
extraembryonic component
25
liver
23
artery
22
brain
21
lung
17
heart
14
embryo
14
vein
13
eye
12
bone element
12
lymphatic vessel
11
bone marrow
11
bronchus
8
blood
8
bodily fluid
8
prostate gland
6
placenta
5
esophagus
4
intestine
4
trachea
3
mouth
3
spinal cord
2
stomach
2
uterus
1
adipose tissue
1
adrenal gland
1
limb
1
pericardium
1
thyroid gland
Project
1344
AMP
281
KPMP
56
T1D
19
LungMap
2
community
Genome assembly (visualization)
1781
hg19
GRCh38
assembly!
GRCh38
month_released!
June, 2020
November, 2022
BIOSAMPLE
TYPE
1702 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
differential activity
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
CD8-positive, alpha-beta T cell
3
7
4
3
30
1
common myeloid progenitor, CD34-positive
27
14
B cell
2
14
10
3
monocyte
15
2
3
2
1
1
2
1
1
CD14-positive monocyte
8
19
+ See 374 more…
See all biosamples
Download