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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
DNase-seq
1
Hi-C
1
RRBS
Assay category
14
DNA binding
2
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
13
control
1
RNA binding protein
1
transcription factor
Date released
134
May, 2022
102
May, 2020
88
February, 2023
57
May, 2021
56
September, 2020
46
February, 2021
17
August, 2017
13
July, 2019
12
October, 2019
8
January, 2021
8
June, 2019
3
November, 2017
3
October, 2022
1
August, 2021
1
March, 2020
1
May, 2019
1
November, 2018
1
September, 2018
Available data
16
bam
16
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
1
tagAlign
Organism
18
Homo sapiens
Biosample type
157
tissue
25
in vitro differentiated cells
18
primary cell
6
cell line
4
stem cell
Organ
13
epithelium
12
pancreas
1
blood vessel
1
vasculature
1
vein
Project
18
AMP
Genome assembly (visualization)
48
hg19
GRCh38
Lab
18
AMP-T2D consortium
assembly!
GRCh38
month_released!
November, 2019
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
Hi-C
RRBS
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
2
1
endothelial cell of umbilical vein
1
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