Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
445
gene expression
328
candidate regulatory elements
238
target gene predictions
181
accessible chromatin
122
differential activity
119
histone modifications
93
binding sites
74
variant allelic effects
33
chromatin state
11
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
448
February, 2021
322
September, 2022
281
September, 2023
147
May, 2021
109
February, 2024
85
May, 2020
52
June, 2020
39
August, 2021
36
January, 2021
34
May, 2022
29
October, 2022
19
April, 2020
16
February, 2020
16
March, 2023
9
November, 2022
6
August, 2017
5
March, 2020
2
August, 2018
2
May, 2024
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2020
Available data
1049
bed bed3+
535
tsv
108
txt
106
bigWig
27
bed bed9+
2
bigBed narrowPeak
Organism
1616
Homo sapiens
Biosample type
1957
cell line
1764
tissue
1661
primary cell
402
in vitro differentiated cells
4
stem cell
Organ
601
epithelium
290
kidney
193
connective tissue
122
vasculature
pancreas
80
blood vessel
73
skin of body
35
musculature of body
35
penis
33
mammary gland
29
extraembryonic component
27
liver
25
artery
23
brain
21
lung
17
heart
16
embryo
15
eye
15
vein
12
bone element
12
bronchus
12
lymphatic vessel
11
bone marrow
9
blood
9
bodily fluid
8
prostate gland
7
placenta
5
esophagus
5
trachea
4
intestine
3
mouth
3
spinal cord
3
uterus
2
stomach
1
adipose tissue
1
adrenal gland
1
gonad
1
limb
1
pericardium
1
thyroid gland
Project
1323
AMP
281
KPMP
36
T1D
19
LungMap
2
community
Genome assembly (visualization)
1727
hg19
GRCh38
assembly!
GRCh38
organ_slims!
nerve
pancreas
small intestine
BIOSAMPLE
TYPE
1661 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
CD8-positive, alpha-beta T cell
3
7
4
3
30
1
common myeloid progenitor, CD34-positive
27
14
monocyte
15
2
5
2
1
1
2
1
1
B cell
2
14
10
3
CD14-positive monocyte
8
19
+ See 369 more…
See all biosamples
Download