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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ATAC-seq
9
total RNA-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
46
DNA accessibility
10
Transcription
Date released
126
August, 2017
85
February, 2021
81
October, 2019
66
August, 2021
66
May, 2022
56
February, 2023
47
September, 2023
31
May, 2020
29
October, 2018
25
November, 2017
23
May, 2019
19
April, 2020
16
April, 2019
16
July, 2019
12
December, 2017
10
March, 2020
9
October, 2017
8
January, 2021
4
December, 2018
4
July, 2018
4
November, 2018
4
November, 2020
4
September, 2017
3
May, 2023
2
January, 2018
2
March, 2019
2
May, 2021
1
August, 2022
1
December, 2019
1
January, 2019
1
November, 2019
Available data
28
bed narrowPeak
5
bed bed3
tsv
4
txt
Organism
56
Homo sapiens
Biosample type
76
primary cell
56
tissue
16
in vitro differentiated cells
6
cell line
Organ
27
eye
18
pancreas
12
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
connective tissue
1
heart
Project
38
AMP
18
T1D
Genome assembly (visualization)
GRCh38
33
hg19
Lab
38
AMP-T2D consortium
18
Kyle Gaulton, UCSD
assembly!
GRCh38
files.file_type!
tsv
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
tissue
islet of Langerhans
11
5
2
retina
15
pigmented layer of retina
12
acetabular part of hip bone
1
1
ilium
1
1
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