Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
21
total RNA-seq
20
ATAC-seq
4
WGBS
1
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
Assay category
28
DNA binding
22
Transcription
21
DNA accessibility
5
DNA methylation
1
3D chromatin structure
Target of assay
control
28
histone
28
histone modification
16
narrow histone mark
12
broad histone mark
Date released
40
May, 2022
25
August, 2017
8
May, 2020
2
March, 2020
1
February, 2020
1
February, 2021
1
July, 2019
Available data
28
bed narrowPeak
28
bigWig
25
tagAlign
8
bam
2
fastq
2
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
csv
1
hic
Organism
78
Homo sapiens
Biosample type
78
tissue
73
cell line
2
primary cell
Organ
128
kidney
106
heart
92
bone element
92
pancreas
78
liver
53
eye
43
connective tissue
42
adipose tissue
37
brain
36
musculature of body
20
lung
15
epithelium
12
blood vessel
12
vasculature
9
limb
8
skeleton
5
gonad
5
ovary
4
artery
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
78
AMP
Genome assembly (visualization)
267
hg19
GRCh38
Lab
40
Karen Mohlke, UNC
38
AMP-T2D consortium
assembly!
GRCh38
target.investigated_as!
control
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
DNase-seq
Hi-C
RRBS
pCHi-C
single cell RNA-seq
tissue
liver
28
20
20
3
1
1
1
1
right lobe of liver
1
1
1
Download