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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
20
total RNA-seq
4
pCHi-C
3
ChIP-seq
Assay category
28
DNA accessibility
20
Transcription
3
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
21
October, 2019
2
February, 2020
1
June, 2019
Available data
27
bed narrowPeak
6
tsv
1
bam
1
bed bedMethyl
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
54
tissue
1
primary cell
Organ
305
pancreas
226
liver
221
epithelium
112
connective tissue
93
bone element
79
kidney
67
brain
66
adipose tissue
54
eye
40
musculature of body
38
vasculature
37
blood vessel
33
heart
26
limb
20
lung
15
blood
15
bodily fluid
12
nerve
11
artery
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
33
hg19
GRCh38
Lab
55
AMP-T2D consortium
assembly!
GRCh38
files.file_type!
bigBed bedMethyl
month_released!
August, 2021
BIOSAMPLE
ASSAY
55 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
C1 segment of cervical spinal cord
1
primary cell
retinal pigment epithelial cell
1
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