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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
15
RRBS
8
Hi-C
4
WGBS
2
FAIRE-seq
Assay category
19
DNA methylation
18
DNA accessibility
8
3D chromatin structure
Date released
214
August, 2021
176
May, 2022
134
May, 2020
124
August, 2017
123
May, 2021
107
October, 2019
102
February, 2021
94
February, 2023
48
March, 2020
47
September, 2023
29
July, 2019
25
February, 2020
25
November, 2017
24
May, 2019
19
April, 2020
18
September, 2020
16
April, 2019
16
January, 2021
10
November, 2020
8
June, 2019
6
October, 2017
5
December, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
3
January, 2018
3
May, 2023
2
March, 2019
2
October, 2018
1
August, 2022
Available data
15
bed bedMethyl
15
bigBed bedMethyl
6
bigWig
4
bed bed3+
4
hdf5
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
Organism
45
Homo sapiens
Biosample type
24
tissue
21
primary cell
Organ
10
pancreas
8
blood
8
bodily fluid
8
epithelium
6
brain
5
kidney
5
musculature of body
4
heart
4
limb
4
vasculature
3
blood vessel
3
liver
2
connective tissue
1
eye
1
pericardium
Project
29
AMP
16
T1D
Genome assembly (visualization)
91
hg19
GRCh38
Lab
29
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
files.file_type!
fastq
BIOSAMPLE
ASSAY
45 results
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Clear Filters
snATAC-seq
RRBS
Hi-C
WGBS
FAIRE-seq
tissue
islet of Langerhans
4
1
pancreas
4
1
gastrocnemius medialis
4
heart left ventricle
1
2
kidney
1
1
+ See 5 more…
primary cell
peripheral blood mononuclear cell
8
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
+ See 9 more…
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