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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
47
ChIP-seq
2
total RNA-seq
1
pCHi-C
Assay category
100
DNA accessibility
47
DNA binding
2
Transcription
Target of assay
37
control
9
histone
9
histone modification
9
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
212
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
103
October, 2019
56
September, 2020
47
September, 2023
38
March, 2020
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
July, 2018
4
March, 2023
4
September, 2017
3
May, 2023
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
91
bam
54
bigWig
31
tagAlign
9
bed narrowPeak
1
tsv
Organism
150
Homo sapiens
Biosample type
102
primary cell
47
tissue
1
cell line
Organ
32
liver
11
heart
5
kidney
Project
150
AMP
Genome assembly (visualization)
325
hg19
GRCh38
Lab
150
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assembly!
GRCh38
files.file_type!
hic
month_released!
July, 2018
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
31
heart left ventricle
7
kidney
5
heart
2
heart right ventricle
2
cell line
HepG2
1
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