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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
317
control
204
histone
204
histone modification
103
broad histone mark
101
narrow histone mark
55
transcription factor
13
RNA binding protein
5
nucleotide modification
2
chromatin remodeller
1
recombinant protein
Date released
40
November, 2017
12
May, 2021
August, 2021
1
April, 2019
1
August, 2017
1
November, 2018
Available data
42
bam
42
fastq
37
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
3
tar
Organism
55
Homo sapiens
Biosample type
41
cell line
12
in vitro differentiated cells
1
primary cell
1
tissue
Organ
41
liver
1
kidney
Project
55
AMP
Genome assembly (visualization)
476
hg19
GRCh38
Lab
43
AMP-T2D consortium
12
Kyle Gaulton, UCSD
Audit category:
8
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
files.file_type!
txt
month_released!
August, 2021
organ_slims!
vein
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
cell line
HepG2
41
in vitro differentiated cells
embryonic stem cell
12
primary cell
skeletal muscle myoblast
1
tissue
kidney
1
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