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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
1
Hi-C
Assay category
7
Transcription
1
3D chromatin structure
Date released
5
February, 2021
1
March, 2019
1
November, 2018
1
September, 2018
Available data
285
fastq
283
bam
188
tsv
161
txt
153
zippedFastqFolder
145
bigWig
111
bed narrowPeak
97
tagAlign
26
bed broadPeak
21
bedpe bed3+
20
hic
17
bed bedMethyl
17
bigBed bedMethyl
13
bed bed3+
12
bigBed narrowPeak
10
bed bed3
7
bed bedgraph
7
csv
4
bigBed broadPeak
3
cool
3
hdf5
2
ibed
1
bedpe
1
tar
Organism
8
Homo sapiens
Biosample type
6
tissue
2
primary cell
Organ
5
kidney
liver
1
pancreas
Project
8
AMP
Genome assembly (visualization)
1
hg19
Lab
7
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
5
audit script error
assembly!
GRCh38
organ_slims!
bone marrow
liver
BIOSAMPLE
ASSAY
8 results
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single cell RNA-seq
Hi-C
tissue
kidney
5
islet of Langerhans
1
primary cell
pancreatic cell
2
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