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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
Assay category
4
DNA binding
Target of assay
142
control
42
transcription factor
7
RNA binding protein
4
histone
4
histone modification
2
broad histone mark
2
chromatin remodeller
2
narrow histone mark
1
recombinant protein
Date released
2
November, 2017
1
December, 2017
1
October, 2017
Available data
84
tagAlign
66
bigWig
64
bed narrowPeak
23
bed broadPeak
13
bam
4
fastq
2
bigBed broadPeak
1
bigBed narrowPeak
Organism
4
Homo sapiens
Biosample type
2
cell line
1
in vitro differentiated cells
1
tissue
Organ
2
blood vessel
epithelium
2
liver
2
vasculature
2
vein
1
brain
1
embryo
Project
4
AMP
Genome assembly (visualization)
176
hg19
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
organ_slims!
epithelium
BIOSAMPLE
ASSAY
4 results
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ChIP-seq
cell line
HepG2
2
in vitro differentiated cells
pancreatic endoderm
1
tissue
brain
1
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