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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17ChIP-seq
  • 1DNase-seq
Assay category
  • 17DNA binding
  • 1DNA accessibility
Target of assay
  • 13transcription factor
  • 4histone
  • 4histone modification
  • 3broad histone mark
  • 2RNA binding protein
  • 1narrow histone mark
Date released
  • 14November, 2017
  • 2August, 2017
  • 2October, 2019
Available data
  • 433bam
  • 407fastq
  • 239bigWig
  • 200tsv
  • 185bed narrowPeak
  • 161txt
  • 153zippedFastqFolder
  • 152tagAlign
  • 44bigBed narrowPeak
  • 40bed broadPeak
  • 23bedpe bed3+
  • 22hic
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • 18bigBed broadPeak
  • 15bed bed3+
  • 10bed bed3
  • 8csv
  • 7bed bedgraph
  • 4hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1vcf
Organism
  • 18Homo sapiens
Biosample type
  • 14cell line
  • 4primary cell
Organ
  • 14liver
  • 2blood vessel
  • 2epithelium
  • 2vasculature
  • 2vein
Project
  • 18AMP
Genome assembly (visualization)
  • GRCh38
  • 262hg19
Lab
  • 18AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

18 results

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ChIP-seq
DNase-seq
cell line
HepG214
primary cell
endothelial cell of umbilical vein2
skeletal muscle myoblast11
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