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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
Hi-C
3
FAIRE-seq
2
DNase-seq
Assay category
22
DNA binding
5
DNA accessibility
4
3D chromatin structure
Target of assay
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
55
November, 2017
53
May, 2020
40
May, 2021
25
August, 2017
20
May, 2022
16
August, 2021
8
January, 2018
6
July, 2019
6
October, 2019
4
March, 2020
3
February, 2023
1
April, 2019
1
May, 2019
1
November, 2018
Available data
68
tagAlign
38
fastq
36
bam
31
bigWig
26
bed narrowPeak
22
bed broadPeak
19
bed bedMethyl
19
bigBed bedMethyl
6
bigBed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed broadPeak
Organism
31
Homo sapiens
Biosample type
23
tissue
8
primary cell
Organ
13
musculature of body
7
pancreas
4
brain
2
blood vessel
2
connective tissue
2
epithelium
2
vasculature
1
adipose tissue
1
kidney
1
liver
Project
31
AMP
Genome assembly (visualization)
346
hg19
GRCh38
Lab
31
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ChIP-seq
Hi-C
FAIRE-seq
DNase-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
1
frontal cortex
1
kidney
1
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
2
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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