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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
4
RRBS
2
WGBS
1
DNase-seq
1
FAIRE-seq
Assay category
29
DNA binding
6
DNA methylation
2
DNA accessibility
Target of assay
29
control
1
RNA binding protein
transcription factor
Date released
76
February, 2023
61
November, 2017
45
February, 2021
38
September, 2020
37
August, 2017
27
October, 2018
24
May, 2022
17
December, 2017
8
February, 2018
8
November, 2018
5
December, 2018
5
January, 2018
4
January, 2019
4
September, 2017
3
October, 2017
1
August, 2018
1
March, 2019
1
September, 2018
Available data
68
tagAlign
37
fastq
32
bam
24
bigWig
23
bed narrowPeak
21
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
bigBed narrowPeak
1
bigBed broadPeak
Organism
36
Homo sapiens
Biosample type
17
tissue
15
primary cell
5
in vitro differentiated cells
Organ
16
pancreas
12
epithelium
9
liver
7
connective tissue
2
adipose tissue
2
musculature of body
Project
37
AMP
Genome assembly (visualization)
208
hg19
GRCh38
Lab
37
AMP-T2D consortium
assembly!
GRCh38
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
RRBS
WGBS
DNase-seq
FAIRE-seq
tissue
liver
7
1
1
adipose tissue
1
1
islet of Langerhans
1
1
pancreas
2
skeletal muscle tissue
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
1
1
in vitro differentiated cells
adipocyte
5
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