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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
whole genome sequencing assay
Assay category
4
3D chromatin structure
1
DNA sequencing
Date released
4
July, 2019
1
August, 2021
Available data
433
bam
407
fastq
239
bigWig
199
tsv
185
bed narrowPeak
161
txt
153
zippedFastqFolder
152
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
liver
2
vasculature
1
connective tissue
Project
5
AMP
Genome assembly (visualization)
5
hg19
GRCh38
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
assembly!
GRCh38
organ_slims!
ovary
BIOSAMPLE
ASSAY
5 results
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Clear Filters
Hi-C
whole genome sequencing assay
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
HepG2
1
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