Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
149
ChIP-seq
Assay category
149
DNA binding
Target of assay
84
histone
84
histone modification
65
control
45
broad histone mark
39
narrow histone mark
Date released
68
August, 2017
31
May, 2020
24
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
February, 2021
1
May, 2021
Available data
429
bam
362
fastq
239
bigWig
186
tsv
185
bed narrowPeak
153
zippedFastqFolder
149
tagAlign
72
txt
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
13
bed bed3+
10
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
vcf
Organism
148
Homo sapiens
Biosample type
122
tissue
22
in vitro differentiated cells
3
cell line
2
primary cell
Organ
55
liver
36
brain
22
connective tissue
15
musculature of body
11
pancreas
8
adipose tissue
2
epithelium
Project
149
AMP
Genome assembly (visualization)
GRCh38
233
hg19
Lab
149
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
files.file_type!
xls
month_released!
February, 2021
BIOSAMPLE
ASSAY
149 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
3
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
Download