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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 83ChIP-seq
  • 1DNase-seq
  • 1Hi-C
Assay category
  • 83DNA binding
  • 13D chromatin structure
  • 1DNA accessibility
Target of assay
  • 75control
  • 8transcription factor
  • 2RNA binding protein
  • 1recombinant protein
Date released
  • 47November, 2017
  • 12October, 2018
  • 8August, 2017
  • 8December, 2017
  • 5November, 2018
  • 3January, 2019
  • 1December, 2018
  • 1October, 2017
Available data
  • 85fastq
  • 84bam
  • 6bigWig
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 2tagAlign
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 84Homo sapiens
Biosample type
  • 53cell line
  • 31tissue
  • 1primary cell
Organ
  • 61liver
  • 12adipose tissue
  • 12connective tissue
  • 4blood
  • 4bodily fluid
  • 3pancreas
  • 3spleen
  • 1brain
Project
  • 85AMP
Genome assembly (visualization)
  • 480hg19
  • GRCh38
Lab
  • 85AMP-T2D consortium
Audit category:
  • 1missing controlled_by
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

85 results

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Clear Filters
ChIP-seq
DNase-seq
Hi-C
cell line
HepG2481
GM128784
tissue
liver12
subcutaneous adipose tissue7
omental fat pad4
spleen3
pancreas2
primary cell
skeletal muscle myoblast1
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