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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 43ChIP-seq
  • 40ATAC-seq
  • 16snATAC-seq
  • 5GRO-seq
  • 1FAIRE-seq
  • 1Hi-C
  • 1single cell RNA-seq
Assay category
  • 57DNA accessibility
  • 43DNA binding
  • 13D chromatin structure
  • 1Transcription
Target of assay
  • 38control
  • 5transcription factor
Date released
  • 39May, 2022
  • 27November, 2017
  • 16February, 2021
  • 10December, 2017
  • 5January, 2018
  • 3August, 2017
  • 3January, 2019
  • 1December, 2018
  • 1March, 2019
  • 1November, 2018
  • 1September, 2020
Available data
  • 67fastq
  • 45bam
  • 40zippedFastqFolder
  • 11bigWig
  • 5bed broadPeak
  • 4bigBed broadPeak
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 107Homo sapiens
Biosample type
  • 56primary cell
  • 31cell line
  • 13tissue
  • 6in vitro differentiated cells
  • 1stem cell
Organ
  • 42pancreas
  • 40epithelium
  • 38liver
  • 3blood
  • 3bodily fluid
  • 3embryo
Project
  • 56HPAP
  • 51AMP
Genome assembly (visualization)
  • 104hg19
  • GRCh38
  • 5hg18
Lab
  • 56Klaus Kaestner, Upenn
  • 50AMP-T2D consortium
  • 1Mark McCarthy, Oxford
Audit category:
  • 16audit script error
  • 1inconsistent ontology term
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

107 results

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Clear Filters
ChIP-seq
ATAC-seq
snATAC-seq
GRO-seq
FAIRE-seq
Hi-C
single cell RNA-seq
primary cell
pancreatic alpha cell22
Langerhans cell161
pancreatic beta cell13
pancreatic acinar cell4
cell line
HepG2271
GM128783
tissue
liver10
islet of Langerhans11
pancreas1
in vitro differentiated cells
pancreatic endoderm11
Hepatic endoderm1
Posterior foregut1
definitive endodermal cell1
primitive gut cell1
stem cell
hESC1
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