Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
5
total RNA-seq
4
Hi-C
4
WGBS
3
ATAC-seq
2
pCHi-C
1
RNA microarray
Assay category
74
DNA binding
5
Transcription
4
3D chromatin structure
4
DNA methylation
3
DNA accessibility
Target of assay
41
control
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
Date released
41
August, 2017
18
October, 2018
18
October, 2019
5
February, 2020
4
July, 2019
2
May, 2019
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
Available data
37
bam
21
fastq
8
tagAlign
6
tsv
4
bigWig
3
bed narrowPeak
2
bigBed narrowPeak
1
bed broadPeak
1
bedpe bed3+
Organism
92
Homo sapiens
Biosample type
92
tissue
1
in vitro differentiated cells
Organ
305
pancreas
258
liver
224
epithelium
141
kidney
125
heart
113
connective tissue
69
brain
67
adipose tissue
55
eye
43
musculature of body
43
vasculature
41
blood vessel
26
limb
20
lung
15
blood
bodily fluid
12
nerve
11
artery
10
vein
9
bone element
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
93
AMP
Genome assembly (visualization)
130
hg19
GRCh38
Lab
93
AMP-T2D consortium
assembly!
GRCh38
month_released!
February, 2021
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
93 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
ATAC-seq
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue
36
3
subcutaneous adipose tissue
10
1
1
tibial nerve
11
1
omental fat pad
8
1
adipose tissue
1
1
3
1
+ See 4 more…
in vitro differentiated cells
white fat cell
1
See all biosamples
Download