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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
8
snATAC-seq
7
ChIP-seq
6
total RNA-seq
1
RRBS
Assay category
36
DNA accessibility
7
DNA binding
6
Transcription
1
DNA methylation
Target of assay
7
control
Date released
October, 2019
31
February, 2023
8
January, 2021
3
January, 2019
3
November, 2018
2
February, 2020
1
January, 2018
1
July, 2019
1
June, 2019
Available data
27
bed narrowPeak
7
bam
6
fastq
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
50
Homo sapiens
Biosample type
33
tissue
10
primary cell
7
cell line
Organ
301
pancreas
260
liver
218
epithelium
141
kidney
126
heart
114
connective tissue
93
bone element
66
adipose tissue
61
brain
43
musculature of body
34
eye
31
vasculature
29
blood vessel
20
lung
15
blood
15
bodily fluid
9
limb
9
spleen
8
artery
8
embryo
8
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
42
AMP
8
T1D
Genome assembly (visualization)
89
hg19
GRCh38
Lab
42
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assembly!
GRCh38
month_released!
October, 2019
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
snATAC-seq
ChIP-seq
total RNA-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
2
tibial nerve
1
primary cell
peripheral blood mononuclear cell
8
retinal pigment epithelial cell
1
1
cell line
GM12878
1
6
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