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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
323
control
213
histone
213
histone modification
109
broad histone mark
104
narrow histone mark
66
transcription factor
14
RNA binding protein
5
nucleotide modification
2
chromatin remodeller
1
recombinant protein
Date released
40
November, 2017
12
May, 2021
11
August, 2021
1
April, 2019
1
August, 2017
1
November, 2018
Available data
48
bigWig
44
bed narrowPeak
42
bam
42
fastq
33
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
3
tar
Organism
66
Homo sapiens
Biosample type
52
cell line
12
in vitro differentiated cells
1
primary cell
1
tissue
Organ
52
liver
1
kidney
Project
66
AMP
Genome assembly (visualization)
481
hg19
GRCh38
Lab
43
AMP-T2D consortium
12
Kyle Gaulton, UCSD
11
Bing Ren, UCSD
Audit category:
8
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
month_released!
September, 2023
organ_slims!
skeleton
spleen
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
cell line
HepG2
52
in vitro differentiated cells
embryonic stem cell
12
primary cell
skeletal muscle myoblast
1
tissue
kidney
1
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