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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
Assay category
126
DNA binding
Target of assay
85
control
41
transcription factor
16
histone
histone modification
11
narrow histone mark
7
RNA binding protein
5
broad histone mark
2
chromatin remodeller
Date released
210
August, 2021
200
May, 2022
170
February, 2023
147
February, 2021
126
May, 2020
111
November, 2017
80
October, 2019
69
May, 2021
66
August, 2017
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
16
December, 2017
15
April, 2019
10
November, 2020
8
February, 2018
8
January, 2021
8
June, 2019
7
January, 2018
6
November, 2018
5
December, 2018
5
December, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2017
1
August, 2018
1
August, 2022
1
January, 2019
1
September, 2018
Available data
125
bam
99
fastq
52
bigWig
32
bed narrowPeak
32
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
11
tagAlign
3
tar
Organism
126
Homo sapiens
Biosample type
96
cell line
27
tissue
3
primary cell
Organ
96
liver
15
brain
10
heart
5
kidney
2
epithelium
2
vasculature
1
blood vessel
Project
126
AMP
Genome assembly (visualization)
262
hg19
GRCh38
Lab
126
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
organ_slims!
bodily fluid
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
126 results
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Clear Filters
ChIP-seq
cell line
HepG2
96
tissue
heart left ventricle
6
kidney
5
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
+ See 5 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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