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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 27snATAC-seq
  • 18single cell RNA-seq
  • 6WGBS
  • 4ATAC-seq
  • 3ChIP-seq
  • 3snDrop-seq
  • 2pCHi-C
Assay category
  • 31DNA accessibility
  • 18Transcription
  • 6DNA methylation
  • 3DNA binding
Target of assay
  • 3control
Date released
  • 214August, 2021
  • 200May, 2022
  • 170February, 2023
  • 162August, 2017
  • 147February, 2021
  • 134May, 2020
  • 126November, 2017
  • 123May, 2021
  • 107October, 2019
  • 56September, 2020
  • 48March, 2020
  • 47September, 2023
  • 29July, 2019
  • 29October, 2018
  • 25February, 2020
  • 24May, 2019
  • 19April, 2020
  • 17December, 2017
  • 16April, 2019
  • 16January, 2021
  • 10November, 2020
  • 9November, 2018
  • 9October, 2017
  • 8February, 2018
  • 8January, 2018
  • 8June, 2019
  • 5December, 2018
  • 5December, 2019
  • 4January, 2019
  • 4July, 2018
  • 4March, 2023
  • 4November, 2019
  • 4October, 2022
  • 4September, 2017
  • 3March, 2019
  • 3May, 2023
  • 1August, 2018
  • 1August, 2022
  • 1September, 2018
Available data
  • 89txt
  • 45fastq
  • 14tsv
  • 6csv
  • 4bam
  • 4bed bedgraph
  • 3tagAlign
  • 2bed bed3+
Organism
  • 147Homo sapiens
Biosample type
  • 93tissue
  • 46primary cell
  • 4cell line
  • 4in vitro differentiated cells
Organ
  • 84bone element
  • 8kidney
  • 6epithelium
  • 6pancreas
  • 5connective tissue
  • 2artery
  • 2blood vessel
  • 2heart
  • 2liver
  • 2vasculature
Project
  • 102AMP
  • 45HPAP
Genome assembly (visualization)
  • 574hg19
  • GRCh38
Lab
  • 102AMP-T2D consortium
  • 45Klaus Kaestner, Upenn
Audit category:
  • 84inconsistent ontology term
  • 32audit script error
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

147 results

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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element84
kidney5
kidney (Cortex-Medulla)1
kidney (cortex)1
kidney (medulla)1
primary cell
Langerhans cell2712
pancreatic alpha cell6
osteoblast1
cell line
smooth muscle cell of the coronary artery2
HepG21
iPSC derived cell line1
in vitro differentiated cells
adipocyte4
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