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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75ChIP-seq
  • 21ATAC-seq
  • 17pCHi-C
  • 9total RNA-seq
  • 1DNAme array
Assay category
  • 75DNA binding
  • 21DNA accessibility
  • 9Transcription
  • 1DNA methylation
Target of assay
  • 54histone
  • 54histone modification
  • 32broad histone mark
  • 22narrow histone mark
  • 12transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 214August, 2021
  • 200May, 2022
  • 170February, 2023
  • 162August, 2017
  • 147February, 2021
  • 134May, 2020
  • 126November, 2017
  • 123May, 2021
  • 107October, 2019
  • 56September, 2020
  • 48March, 2020
  • 47September, 2023
  • 29July, 2019
  • 29October, 2018
  • 25February, 2020
  • 24May, 2019
  • 19April, 2020
  • 17December, 2017
  • 16April, 2019
  • 16January, 2021
  • 10November, 2020
  • 9November, 2018
  • 9October, 2017
  • 8February, 2018
  • 8January, 2018
  • 8June, 2019
  • 5December, 2018
  • 5December, 2019
  • 4January, 2019
  • 4July, 2018
  • 4March, 2023
  • 4November, 2019
  • 4October, 2022
  • 4September, 2017
  • 3March, 2019
  • 3May, 2023
  • 1August, 2018
  • 1August, 2022
  • 1September, 2018
Available data
  • 40bigWig
  • 30bed narrowPeak
  • 2bed bed3+
  • 1bam
  • 1tagAlign
Organism
  • 123Homo sapiens
Biosample type
  • 57primary cell
  • 48in vitro differentiated cells
  • 16cell line
  • 2tissue
Organ
  • 18pancreas
  • 17epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 106AMP
  • 17T1D
Genome assembly (visualization)
  • 316hg19
  • GRCh38
Lab
  • 100Kyle Gaulton, UCSD
  • 23AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

123 results

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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell3312
monocyte1111
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
embryonic stem cell3755
pancreatic PP cell1
cell line
EndoC_BH116
tissue
pancreas1
thymus1
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