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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
71
control
40
transcription factor
15
histone
15
histone modification
10
narrow histone mark
6
RNA binding protein
broad histone mark
2
chromatin remodeller
Date released
212
August, 2021
200
May, 2022
170
February, 2023
147
February, 2021
134
May, 2020
121
November, 2017
102
August, 2017
102
October, 2019
91
May, 2021
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2017
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
111
bam
100
fastq
54
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
19
tagAlign
14
bed broadPeak
13
bigBed broadPeak
3
tar
Organism
121
Homo sapiens
Biosample type
97
cell line
21
tissue
3
primary cell
Organ
97
liver
24
brain
2
epithelium
2
vasculature
1
blood vessel
Project
121
AMP
Genome assembly (visualization)
271
hg19
GRCh38
Lab
121
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
month_released!
February, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
cell line
HepG2
97
tissue
cingulate gyrus
6
layer of hippocampus
4
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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