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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 66ChIP-seq
  • 16ATAC-seq
  • 14total RNA-seq
  • 4Hi-C
  • 4pCHi-C
  • 2DNase-seq
  • 1FAIRE-seq
Assay category
  • 66DNA binding
  • 19DNA accessibility
  • 14Transcription
  • 43D chromatin structure
Target of assay
  • 39control
  • 27histone
  • 27histone modification
  • 22narrow histone mark
  • 5broad histone mark
Date released
  • 214August, 2021
  • 200May, 2022
  • 170February, 2023
  • 162August, 2017
  • 147February, 2021
  • 134May, 2020
  • 126November, 2017
  • 123May, 2021
  • 107October, 2019
  • 56September, 2020
  • 48March, 2020
  • 47September, 2023
  • 29July, 2019
  • 29October, 2018
  • 25February, 2020
  • 24May, 2019
  • 19April, 2020
  • 17December, 2017
  • 16April, 2019
  • 16January, 2021
  • 10November, 2020
  • 9November, 2018
  • 9October, 2017
  • 8February, 2018
  • 8January, 2018
  • 8June, 2019
  • 5December, 2018
  • 5December, 2019
  • 4January, 2019
  • 4July, 2018
  • 4March, 2023
  • 4November, 2019
  • 4October, 2022
  • 4September, 2017
  • 3March, 2019
  • 3May, 2023
  • 1August, 2018
  • 1August, 2022
  • 1September, 2018
Available data
  • 46bam
  • 9tagAlign
  • 6bigWig
  • 4bigBed narrowPeak
  • 4hic
  • 3bedpe bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bed narrowPeak
  • 1tar
Organism
  • 107Homo sapiens
Biosample type
  • 81tissue
  • 12primary cell
  • 10cell line
  • 4in vitro differentiated cells
Organ
  • 21eye
  • 17limb
  • 14blood vessel
  • 14vasculature
  • 12epithelium
  • 11nerve
  • 10pancreas
  • 9vein
  • 8brain
  • 8kidney
  • 5artery
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 1adipose tissue
  • 1heart
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 107AMP
Genome assembly (visualization)
  • 217hg19
  • GRCh38
Lab
  • 107AMP-T2D consortium
Audit category:
  • 5inconsistent ontology term
  • 1audit script error
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

107 results

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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
DNase-seq
FAIRE-seq
tissue
islet of Langerhans2113144
tibial nerve11
tibial artery5
kidney2
adipose tissue1
primary cell
endothelial cell of umbilical vein711
epithelial cell of proximal tubule1
kidney glomerular epithelial cell1
kidney tubule cell1
cell line
Panc17
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
RCC 7860 vector1
in vitro differentiated cells
adipocyte2
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
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