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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1411
candidate regulatory elements
908
target gene predictions
839
histone modifications
772
binding sites
624
gene expression
468
accessible chromatin
153
differential activity
123
variant allelic effects
68
chromatin state
32
eQTL
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
2
Fine-mapped variants
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2374
February, 2021
1398
September, 2022
270
May, 2021
269
September, 2023
259
June, 2020
145
February, 2024
134
May, 2020
85
October, 2022
84
August, 2021
63
March, 2023
54
January, 2021
52
March, 2020
42
May, 2022
37
November, 2022
32
February, 2020
29
March, 2024
28
August, 2017
26
February, 2023
18
January, 2020
13
April, 2020
8
August, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2018
1
January, 2022
1
July, 2020
1
November, 2019
Available data
4546
bed bed3+
736
tsv
152
bigWig
101
txt
34
bed bed9+
24
csv
15
bigBed narrowPeak
8
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5380
Homo sapiens
Biosample type
1884
cell line
1637
tissue
1546
primary cell
355
in vitro differentiated cells
3
stem cell
Organ
715
epithelium
547
kidney
connective tissue
314
brain
279
musculature of body
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
pericardium
Project
5083
AMP
266
KPMP
55
T1D
13
LungMap
9
community
1
ITG
Genome assembly (visualization)
6154
hg19
GRCh38
2
hg18
assembly!
GRCh38
organ_slims!
connective tissue
extraembryonic component
lung
pericardium
BIOSAMPLE
TYPE
5427 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
Fine-mapped variants
pQTL
representative DNase hypersensitivity sites
cell line
EndoC_BH1
1
1
1
8
7
3
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
H1-hESC
1
2
1
2
8
1
+ See 736 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
1
3
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
1
muscle of arm
33
16
1
+ See 215 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
15
5
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 332 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 107 more…
stem cell
H1-hESC
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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