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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 55ChIP-seq
  • 4WGBS
  • 3ATAC-seq
  • 2pCHi-C
  • 2total RNA-seq
  • 1RNA microarray
Assay category
  • 55DNA binding
  • 4DNA methylation
  • 3DNA accessibility
  • 2Transcription
Target of assay
  • 31histone
  • 31histone modification
  • 24control
  • 20broad histone mark
  • 11narrow histone mark
Date released
  • 41August, 2017
  • 18October, 2018
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1January, 2018
  • 1March, 2020
  • 1October, 2019
Available data
  • 21fastq
  • 19bam
  • 8tagAlign
  • 3bigWig
  • 3tsv
  • 2bed narrowPeak
  • 1bed broadPeak
  • 1bedpe bed3+
  • 1bigBed narrowPeak
Organism
  • 66Homo sapiens
Biosample type
  • 66tissue
  • 1in vitro differentiated cells
Organ
  • 311pancreas
  • 260liver
  • 230epithelium
  • 149kidney
  • 127heart
  • 118connective tissue
  • 93bone element
  • 69brain
  • 67adipose tissue
  • 55eye
  • 45vasculature
  • 43blood vessel
  • 43musculature of body
  • 26limb
  • 20lung
  • 15blood
  • 15bodily fluid
  • 13artery
  • 12nerve
  • 10vein
  • 9spleen
  • 8embryo
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 67AMP
Genome assembly (visualization)
  • 426hg19
  • GRCh38
Lab
  • 67AMP-T2D consortium
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

67 results

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Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue363
subcutaneous adipose tissue1011
omental fat pad81
adipose tissue1131
in vitro differentiated cells
white fat cell1
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