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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
8
snATAC-seq
2
single cell RNA-seq
2
total RNA-seq
1
ATAC-seq
Assay category
15
DNA binding
9
DNA accessibility
4
Transcription
Target of assay
15
control
Date released
8
January, 2021
5
October, 2019
3
January, 2019
3
November, 2018
2
August, 2021
2
February, 2020
2
February, 2021
2
May, 2019
1
January, 2018
Available data
15
bam
6
fastq
4
tsv
2
tagAlign
1
bigWig
Organism
28
Homo sapiens
Biosample type
11
tissue
9
cell line
8
primary cell
Organ
305
pancreas
241
liver
229
epithelium
149
kidney
126
heart
102
connective tissue
93
bone element
59
brain
56
adipose tissue
53
eye
44
vasculature
42
blood vessel
35
musculature of body
24
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
9
spleen
9
vein
8
skeleton
7
embryo
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
8
T1D
Genome assembly (visualization)
GRCh38
141
hg19
Lab
20
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assembly!
GRCh38
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
tibial artery
5
1
coronary artery
2
1
pulmonary artery
2
cell line
GM12878
6
1
smooth muscle cell of the coronary artery
2
primary cell
peripheral blood mononuclear cell
8
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