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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
snATAC-seq
14
ChIP-seq
9
single cell RNA-seq
2
pCHi-C
1
ATAC-seq
Assay category
19
DNA accessibility
14
DNA binding
9
Transcription
Target of assay
14
control
Date released
19
April, 2020
8
January, 2021
6
November, 2018
4
December, 2018
4
January, 2019
2
March, 2020
1
January, 2018
Available data
14
bam
14
fastq
2
tsv
1
bigWig
Organism
43
Homo sapiens
Biosample type
29
tissue
8
primary cell
7
cell line
Organ
311
pancreas
260
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
LungMap
17
AMP
8
T1D
Genome assembly (visualization)
GRCh38
69
hg19
Lab
19
Xin Sun, UCSD
17
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assembly!
GRCh38
BIOSAMPLE
ASSAY
44 results
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Clear Filters
snATAC-seq
ChIP-seq
single cell RNA-seq
pCHi-C
ATAC-seq
tissue
lung
10
9
1
spleen
8
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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