Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 80candidate regulatory elements
  • 60target gene predictions
  • 49gene expression
  • 40accessible chromatin
  • 31binding sites
  • 25histone modifications
  • 16variant allelic effects
  • 13eQTL
  • 12differential activity
  • 7chromatin state
  • 2caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 108February, 2021
  • 80September, 2022
  • 20June, 2020
  • 17September, 2023
  • 16May, 2021
  • 14February, 2024
  • 12October, 2022
  • 11August, 2021
  • 10May, 2020
  • 7August, 2017
  • 7February, 2020
  • 7March, 2023
  • 7November, 2022
  • 3April, 2020
  • 3January, 2020
  • 3March, 2020
  • 2January, 2021
  • 2January, 2025
  • 2May, 2024
  • 1August, 2018
  • 1January, 2018
  • 1July, 2025
  • 1June, 2021
  • 1May, 2022
  • 1November, 2020
  • 1October, 2019
Available data
  • 266bed bed3+
  • 56tsv
  • 9bigWig
  • 7txt
  • 2csv
  • 1bigBed bed9
  • 1bigBed narrowPeak
Organism
  • 339Homo sapiens
Collection Tags
  • 80EpiMap
  • 65ChIP-Atlas
  • 65DGA
  • 58ENCODE
  • 31 T2DKP
  • 16AMP
  • 15KPMP
  • 14T2DKP
  • 9CMDGA
  • 7HPAP
  • 3T1D
  • 2GTEx
  • 1BLUEPRINT
  • 1T2D
Biosample type
  • 196primary cell
  • 68tissue
  • 46in vitro differentiated cells
  • 28cell line
  • 1stem cell
Organ
  • 2815vasculature
  • 2800bodily fluid
  • 2791blood
  • 2766blood vessel
  • 2653vein
  • 717epithelium
  • 547kidney
  • 339connective tissue
  • 315brain
  • 286musculature of body
  • 231lung
  • 216pancreas
  • 210intestine
  • 166limb
  • 164heart
  • 157skin of body
  • 135embryo
  • 131large intestine
  • 109extraembryonic component
  • 95liver
  • 93eye
  • 86stomach
  • 67mammary gland
  • 66bone element
  • 64adipose tissue
  • 64prostate gland
  • 60small intestine
  • 54lymph node
  • 54penis
  • 54placenta
  • 48adrenal gland
  • 48ureter
  • 47artery
  • 37gonad
  • 37thymus
  • 31esophagus
  • 30spinal cord
  • 26spleen
  • 25uterus
  • 20testis
  • 18lymphoid tissue
  • 16lymphatic vessel
  • 16ovary
  • 16thyroid gland
  • 14mouth
  • 14nerve
  • 12bronchus
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8tongue
  • 8urinary bladder
  • 7skeleton
  • 7vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 311AMP
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 395hg19
  • GRCh38
  • 2hg18
assembly!
  • GRCh38
BIOSAMPLE
TYPE

339 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
differential activity
chromatin state
caQTL
pQTL
sQTL
primary cell
foreskin fibroblast62142
fibroblast of lung6421
osteoblast222232
fibroblast of dermis441
pancreatic stellate cell1223
tissue
adipose tissue7832113
subcutaneous adipose tissue25141
omental fat pad5221
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4614114
mesenchymal stem cell33111
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM2324821111
fibroblast of cardiac tissue212
HT108021
adipose tissue derived mesenchymal stem cell11
chondrocyte11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego