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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
gene expression
57
target gene predictions
47
candidate regulatory elements
38
accessible chromatin
37
differential activity
16
eQTL
15
variant allelic effects
13
histone modifications
12
binding sites
7
chromatin state
2
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
58
September, 2022
56
February, 2021
51
March, 2023
36
May, 2021
21
February, 2024
20
January, 2021
15
August, 2021
13
March, 2020
9
June, 2020
7
August, 2018
7
May, 2020
6
August, 2017
3
January, 2020
2
February, 2020
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
Available data
188
bed bed3+
87
tsv
24
bigWig
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
312
Homo sapiens
Biosample type
130
primary cell
123
tissue
50
cell line
9
in vitro differentiated cells
Organ
715
epithelium
547
kidney
338
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
290
AMP
20
T1D
2
community
Genome assembly (visualization)
310
hg19
GRCh38
2
hg18
assembly!
GRCh38
organ_slims!
mouth
placenta
BIOSAMPLE
TYPE
312 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
accessible chromatin
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
chromatin state
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
2
1
1
2
1
1
pancreatic ductal cell
3
2
3
3
1
2
1
pancreatic alpha cell
3
3
4
3
1
pancreatic beta cell
3
3
4
3
1
pancreatic delta cell
3
3
4
3
1
+ See 15 more…
tissue
liver
1
10
13
2
1
6
2
1
2
1
islet of Langerhans
11
1
2
10
1
1
2
3
2
2
2
body of pancreas
2
5
8
1
pancreas
5
5
2
1
1
1
1
endocrine pancreas
4
7
+ See 1 more…
cell line
EndoC_BH1
8
1
7
3
1
HepG2
3
2
1
1
3
1
HuH-7
1
1
1
1
1
Panc1
2
2
8988T
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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