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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1072target gene predictions
  • 872histone modifications
  • 833candidate regulatory elements
  • 811binding sites
  • 676gene expression
  • 521accessible chromatin
  • 484differential activity
  • 141variant allelic effects
  • 75chromatin state
  • 54eQTL
  • 18caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 2Fine-mapped variants
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1742February, 2021
  • 1672September, 2022
  • 320May, 2026
  • 292May, 2021
  • 289June, 2020
  • 286September, 2023
  • 156February, 2024
  • 144May, 2020
  • 99October, 2022
  • 95August, 2021
  • 70March, 2023
  • 56January, 2021
  • 56March, 2020
  • 44November, 2022
  • 43May, 2022
  • 39February, 2020
  • 35August, 2017
  • 30March, 2024
  • 26February, 2023
  • 21January, 2020
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1January, 2022
  • 1July, 2020
  • 1June, 2021
  • 1November, 2019
  • 1November, 2020
  • 1October, 2019
Available data
  • 4306bed bed3+
  • 3445tsv
  • 164bigWig
  • 112txt
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 5bed bed9
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8173Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 582DGA
  • 320pyxis
  • 281KPMP
  • 220T1D
  • 150 T2DKP
  • 149AMP
  • 122BLUEPRINT
  • 122ENCODE
  • 94CMDGA
  • 55GTEx
  • 55HPAP
  • 49T2DKP
  • 12ROADMAP
  • 10T2D
Biosample type
  • 4075tissue
  • 1939primary cell
  • 1839cell line
  • 361in vitro differentiated cells
  • 4stem cell
Organ
  • 2789vasculature
  • 2778bodily fluid
  • 2771blood
  • 2754blood vessel
  • 2649vein
  • 665epithelium
  • 480kidney
  • 350connective tissue
  • 282brain
  • 242heart
  • 229pancreas
  • 208musculature of body
  • 170lung
  • 152intestine
  • 118limb
  • 116liver
  • 116skin of body
  • 105embryo
  • 104adipose tissue
  • 95large intestine
  • 84eye
  • 83extraembryonic component
  • 60__MARKER__
  • 58stomach
  • 55bone element
  • 53mammary gland
  • 51artery
  • 50prostate gland
  • 42small intestine
  • 41lymph node
  • 41placenta
  • 36penis
  • 34adrenal gland
  • 30ureter
  • 28gonad
  • 28thymus
  • 22spinal cord
  • 21esophagus
  • 20uterus
  • 17spleen
  • 15testis
  • 14lymphatic vessel
  • 14lymphoid tissue
  • 12ovary
  • 12pituitary gland
  • 12thyroid gland
  • 11nerve
  • 10bone marrow
  • 10bronchus
  • 10mouth
  • 7breast
  • 7urinary bladder
  • 6skeleton
  • 6tongue
  • 5trachea
  • 5vagina
  • 3nose
  • 1pericardium
Project
  • 7841AMP
  • 281KPMP
  • 57T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6164hg19
  • GRCh38
  • 4hg18
assembly!
  • GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

8220 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
sQTL
hQTL
variant to gene
meQTL
other
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
whole blood26351
heart2011914212
stomach2111913
kidney1421417111
brain163161111
primary cell
endothelial cell1129425222
CD8-positive, alpha-beta T cell430331
B cell1082313
monocyte22115541121
natural killer cell5132318
cell line
A5491911821
EndoC_BH11118731
breast cancer cell119
K562716211
MCF-762531
in vitro differentiated cells
hematopoietic multipotent progenitor cell10110111
adipocyte6121144
neural progenitor cell5247
embryonic stem cell11165
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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