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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 872histone modifications
  • 838candidate regulatory elements
  • 811binding sites
  • 521accessible chromatin
  • 239target gene predictions
  • 141variant allelic effects
  • 130differential activity
  • 75chromatin state
  • 60eQTL
  • 12Fine-mapped variants
  • 7sQTL
  • 6caQTL
  • 6gene expression
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2402February, 2021
  • 289June, 2020
  • 202May, 2021
  • 144May, 2020
  • 115September, 2023
  • 99October, 2022
  • 96February, 2024
  • 56January, 2021
  • 45March, 2020
  • 44November, 2022
  • 43May, 2022
  • 42August, 2021
  • 38March, 2025
  • 35August, 2017
  • 26February, 2023
  • 19April, 2020
  • 15March, 2023
  • 7September, 2022
  • 4January, 2020
  • 2January, 2025
  • 2May, 2024
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1February, 2020
  • 1January, 2022
  • 1June, 2021
  • 1November, 2019
  • 1October, 2019
Available data
  • 3474bed bed3+
  • 2797tsv
  • 164bigWig
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 5bed bed9
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 6326Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 932ENCODE
  • 374DGA
  • 126T1D
  • 110KPMP
  • 106 T2DKP
  • 94CMDGA
  • 84BLUEPRINT
  • 45T2DKP
  • 43STARNET
  • 40AMP
  • 12ROADMAP
  • 10T2D
Biosample type
  • 3557tissue
  • 1608cell line
  • 941primary cell
  • 261in vitro differentiated cells
  • 4stem cell
Organ
  • 2754bodily fluid
  • 2750blood
  • 2740vasculature
  • 2712blood vessel
  • 2648vein
  • 348epithelium
  • 215connective tissue
  • 195kidney
  • 176brain
  • 137musculature of body
  • 110pancreas
  • 97intestine
  • 90lung
  • 87skin of body
  • 74eye
  • 71embryo
  • 69heart
  • 69limb
  • 63large intestine
  • 54liver
  • 47adipose tissue
  • 43extraembryonic component
  • 39mammary gland
  • 38lymph node
  • 38stomach
  • 37prostate gland
  • 34bone element
  • 34penis
  • 31artery
  • 22placenta
  • 22small intestine
  • 22ureter
  • 19adrenal gland
  • 19gonad
  • 15esophagus
  • 15thymus
  • 15uterus
  • 13spinal cord
  • 13spleen
  • 11pituitary gland
  • 11testis
  • 9bone marrow
  • 9lymphatic vessel
  • 8bronchus
  • 7lymphoid tissue
  • 7ovary
  • 7thyroid gland
  • 6nerve
  • 5breast
  • 5mouth
  • 5trachea
  • 3tongue
  • 3urinary bladder
  • 2vagina
  • 1nose
  • 1skeleton
Project
  • 6169AMP
  • 110KPMP
  • 57T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5320hg19
  • GRCh38
  • 4hg18
assembly!
  • GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

6373 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
target gene predictions
variant allelic effects
differential activity
chromatin state
eQTL
Fine-mapped variants
sQTL
caQTL
gene expression
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
liver26123227111
retina131221
stomach12132
heart1181212
cell line
breast cancer cell119
EndoC_BH1117113
neuroblastoma cell84
MCF-724311
gastric cancer cell92
primary cell
CD8-positive, alpha-beta T cell307341
CD14-positive monocyte415
common myeloid progenitor, CD34-positive141
monocyte21521121
CD4-positive, alpha-beta T cell823
in vitro differentiated cells
adipocyte121444
embryonic stem cell11615
hematopoietic multipotent progenitor cell1911
T-cell acute lymphoblastic leukemia53
neuroblastoma cell line62
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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