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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
17
pCHi-C
16
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
82
DNA binding
16
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
59
histone
59
histone modification
32
broad histone mark
27
narrow histone mark
17
transcription factor
10
RNA binding protein
6
control
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
40
bed narrowPeak
40
bigWig
1
bam
1
tagAlign
Organism
123
Homo sapiens
Biosample type
43
in vitro differentiated cells
42
tissue
22
primary cell
16
cell line
Organ
40
heart
18
pancreas
17
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
106
AMP
17
T1D
Genome assembly (visualization)
316
GRCh38
hg19
Lab
60
Kyle Gaulton, UCSD
40
Patrick T. Ellinor, Broad
23
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assembly!
hg18
hg19
month_released!
September, 2017
BIOSAMPLE
ASSAY
123 results
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Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
tissue
left cardiac atrium
40
pancreas
1
thymus
1
primary cell
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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cell line
EndoC_BH1
16
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