Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
Hi-C
Assay category
15
3D chromatin structure
Date released
8
March, 2020
2
August, 2021
2
October, 2019
1
March, 2019
1
March, 2023
1
November, 2019
Available data
3081
bam
2860
bigWig
1653
bed narrowPeak
1444
tsv
1084
fastq
928
bigBed narrowPeak
395
tagAlign
309
bed broadPeak
272
bigBed broadPeak
265
bed bed3+
76
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
15
hic
13
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
3
tar
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
11
tissue
3
primary cell
1
cell line
Organ
3
blood vessel
3
heart
3
pancreas
3
vasculature
2
epithelium
2
liver
2
musculature of body
2
vein
1
kidney
Project
14
AMP
HPAP
1
ITG
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
inconsistent ontology term
1
audit script error
assembly!
hg18
audit.ERROR.category!
inconsistent ontology term
award.project!
HPAP
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
cell line
HepG2
1
See all biosamples
Download