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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
target gene predictions
78
candidate regulatory elements
40
chromatin state
10
binding sites
9
accessible chromatin
7
histone modifications
4
gene expression
3
eQTL
Date released
110
September, 2022
56
February, 2021
54
February, 2024
9
June, 2020
7
May, 2021
4
March, 2024
3
August, 2017
3
January, 2022
2
October, 2022
1
March, 2020
Available data
205
bed bed3+
37
bed bed9
4
tsv
Organism
249
Homo sapiens
Biosample type
147
tissue
99
cell line
3
primary cell
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
149
liver
143
extraembryonic component
110
stomach
105
eye
88
bone element
87
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
249
AMP
ENCODE
Genome assembly (visualization)
242
hg19
93
GRCh38
assembly!
hg18
award.project!
ENCODE
organ_slims!
urinary bladder
BIOSAMPLE
TYPE
249 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
tissue
large intestine
14
27
13
1
1
sigmoid colon
7
10
5
1
transverse colon
5
8
4
1
1
colonic mucosa
2
4
3
1
mucosa of rectum
2
4
3
+ See 11 more…
cell line
HeLa-S3
55
5
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
2
1
+ See 5 more…
primary cell
Ishikawa
1
1
1
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