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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
total RNA-seq
Assay category
22
DNA binding
4
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
13
December, 2017
13
February, 2018
May, 2021
Available data
26
bam
26
fastq
18
bigWig
14
bed narrowPeak
4
tsv
3
bed bed3+
Organism
26
Homo sapiens
Biosample type
26
in vitro differentiated cells
cell line
Organ
808
pancreas
682
connective tissue
491
adipose tissue
440
epithelium
390
liver
324
heart
286
brain
273
kidney
170
vasculature
164
blood vessel
122
limb
95
musculature of body
75
artery
70
bone element
61
eye
43
nerve
26
embryo
25
spleen
22
vein
20
lung
18
ureter
12
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
hg18
Lab
26
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
assembly!
hg18
biosample_type!
cell line
files.file_type!
txt
month_released!
May, 2021
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
18
4
Hepatic endoderm
4
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