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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
295
histone
histone modification
162
narrow histone mark
133
broad histone mark
58
control
transcription factor
Date released
23
May, 2020
11
November, 2017
9
August, 2017
9
October, 2019
3
February, 2021
2
October, 2017
1
August, 2021
Available data
1947
bam
1659
bigWig
1469
tsv
630
fastq
475
bed narrowPeak
243
bigBed narrowPeak
218
bed bed3+
207
bed broadPeak
205
bigBed broadPeak
158
txt
153
zippedFastqFolder
64
xls
58
tagAlign
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
3
cool
1
bedpe
1
tar
1
vcf
Organism
57
Homo sapiens
Biosample type
52
tissue
in vitro differentiated cells
4
cell line
2
primary cell
Organ
28
liver
19
brain
2
artery
2
blood vessel
2
heart
2
musculature of body
2
pancreas
2
vasculature
1
adipose tissue
1
connective tissue
1
epithelium
Project
58
AMP
Genome assembly (visualization)
2
hg19
Lab
58
AMP-T2D consortium
assembly!
hg18
biosample_type!
in vitro differentiated cells
target.investigated_as!
histone modification
transcription factor
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
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