Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
3
ChIP-seq
1
Hi-C
1
total RNA-seq
Assay category
6
DNA accessibility
3
DNA binding
1
3D chromatin structure
1
Transcription
Target of assay
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
300
November, 2017
219
May, 2021
170
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
70
August, 2021
62
November, 2018
59
September, 2020
52
August, 2017
48
July, 2018
44
October, 2019
43
April, 2018
41
September, 2018
31
June, 2019
28
December, 2018
24
July, 2019
23
February, 2018
23
March, 2020
22
January, 2019
20
December, 2017
12
November, 2020
11
November, 2019
8
January, 2021
7
August, 2020
7
December, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
May, 2019
2
October, 2018
1
January, 2018
Available data
10
bam
7
bed narrowPeak
2
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
11
Homo sapiens
Biosample type
tissue
6
cell line
5
in vitro differentiated cells
Organ
6
epithelium
6
pancreas
Project
11
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
assembly!
hg18
biosample_type!
tissue
organ_slims!
brain
target.investigated_as!
histone
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
1
3
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
Download