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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1199
candidate regulatory elements
831
target gene predictions
647
accessible chromatin
641
chromatin state
569
gene expression
256
histone modifications
157
differential activity
128
binding sites
128
eQTL
112
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1699
September, 2022
997
February, 2021
333
November, 2021
286
May, 2021
281
September, 2023
178
February, 2024
127
May, 2020
103
June, 2020
85
August, 2021
75
January, 2022
70
March, 2020
61
March, 2023
56
January, 2020
56
January, 2021
46
February, 2020
42
May, 2022
41
May, 2024
30
February, 2023
29
October, 2022
27
March, 2024
26
November, 2022
19
April, 2020
19
August, 2017
12
October, 2019
9
August, 2018
8
April, 2019
8
November, 2019
5
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3219
bed bed3+
736
tsv
589
bed bed9
509
bigWig
108
txt
29
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4695
Homo sapiens
Biosample type
2475
primary cell
2274
cell line
2266
tissue
466
in vitro differentiated cells
3
stem cell
Organ
890
epithelium
610
kidney
brain
384
connective tissue
356
musculature of body
256
vasculature
255
intestine
247
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
122
liver
119
stomach
93
eye
84
small intestine
83
adipose tissue
73
adrenal gland
71
artery
70
placenta
64
ureter
57
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
20
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
4042
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
3926
hg19
1332
GRCh38
hg18
assembly!
hg18
organ_slims!
brain
spleen
BIOSAMPLE
TYPE
4741 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
differential activity
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
primary cell
monocyte
2
18
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
4
1
3
30
B cell
17
10
6
8
2
endothelial cell
3
7
15
9
1
2
1
2
2
+ See 442 more…
tissue
heart
37
20
5
21
3
1
1
2
stomach
40
21
3
19
1
1
1
kidney
29
14
10
16
7
2
1
1
1
lung
33
17
16
1
1
muscle of arm
33
16
1
16
1
+ See 199 more…
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